Welcome to set_up_grasp_models’s documentation!

This small package allows the user to both set up GRASP input model files in a fairly automatic way and to check if they are valid.

Examples can also be found in the examples folder.

• Installation
  • Requirements for users
  • Requirements for developers
• Set up GRASP models
  • Generate a model from scratch
  • Generate a model from an existing model
  • Generating mechanism GRASP patterns
• Check GRASP models
  • Format checks
  • Thermodynamic feasibility checks
  • Mass balance checks
• Misc
  • Reorder model reactions
  • Remove leading and trailing spaces
  • Rename columns in the model
  • Convert model .m file to ODE format
• API
  • Set up GRASP models
  • Check GRASP models
  • Misc
  • IO
  • Model